Temporal Effects of Bradyrhizobium Inoculation and Organic Fertilizer Combinations on Microbial Activity in Improving Soil Health
DOI:
https://doi.org/10.24925/turjaf.v14i7.2051-2058.9018Keywords:
Organic fertilizer , Soil respiration , Dehydrogenase activity , Indole-3-acetic acid , Temporal dynamicsAbstract
Improving soil microbial activity is a critical factor for sustainable agriculture and soil health. This research was conducted to examine the temporal effects of Bradyrhizobium japonicum inoculation and different fertilizer applications on soil microbial activity. The experiment was conducted under pot conditions with eight different application groups (control, urea, vermicompost, Well-rotted farmyard manure and their combinations with bacterial inoculation). Soil respiration (CO₂ release), dehydrogenase activity (DHA) and indole-3-acetic acid (IAA) production capacity were measured weekly during the four-week incubation period. The results showed that organic fertilizer applications increased soil respiration by 46-231% compared to the control. The combination of Bradyrhizobium japonicum and organic fertilizers, especially the combination of Well-rotted farmyard manure (BA+FYM), provided the highest activity values in all parameters. Chemical fertilizer (urea) application showed low activity levels similar to the control group. Soil microbial activity increased rapidly in the first weeks, reached its peak in the third week, and showed a relative decrease in the fourth week. These findings indicate that organic fertilizers and Bradyrhizobium japonicum inoculation strengthen the soil microbial ecosystem and can be used as an alternative to chemical fertilizers in sustainable agricultural practices.
References
Bertola, M., Ferrarini, A., & Visioli, G. (2021). Improvement of Soil Microbial Diversity through Sustainable Agricultural Practices and Its Evaluation by -Omics Approaches: A Perspective for the Environment, Food Quality and Human Safety. Microorganisms, 9(7), 1400. https://doi.org/10.3390/microorganisms9071400
Blagodatskaya, Е., & Kuzyakov, Y. (2008). Mechanisms of real and apparent priming effects and their dependence on soil microbial biomass and community structure: Critical review. Biology and Fertility of Soils, 45(2), 115-131. https://doi.org/10.1007/s00374-008-0334-y
Bunsangiam, S., Thongpae, N., Limtong, S., & Srisuk, N. (2021). Large scale production of indole-3-acetic acid and evaluation of the inhibitory effect of indole-3-acetic acid on weed growth. Scientific Reports, 11(1), 13094. https://doi.org/10.1038/s41598-021-92305-w
Dasgupta, D., Richardson, A. E., Camuy-Vélez, L. A., Kirkby, C., Kirkegaard, J. A., & Banerjee, S. (2024). Microbial dynamics during in-situ organic matter decomposition reveals the importance of keystone taxa in the core microbiome. Applied Soil Ecology, 199, 105396. https://doi.org/10.1016/j.apsoil.2024.105396
Etesami, H., & Glick, B. R. (2024). Bacterial indole-3-acetic acid: A key regulator for plant growth, plant-microbe interactions, and agricultural adaptive resilience. Microbiological Research, 281, 127602. https://doi.org/10.1016/j.micres.2024.127602
Ge, G., Li, Z., Fan, F., Chu, G., Hou, Z., & Liang, Y. (2010). Soil biological activity and their seasonal variations in response to long-term application of organic and inorganic fertilizers. Plant and Soil, 326(1), 31-44. https://doi.org/10.1007/s11104-009-0186-8
Guillaume, T., Bragazza, L., Levasseur, C., Libohova, Z., & Sinaj, S. (2021). Long-term soil organic carbon dynamics in temperate cropland-grassland systems. Agriculture, Ecosystems & Environment, 305, 107184. https://doi.org/10.1016/j.agee.2020.107184
Hara, S., Kakizaki, K., Bamba, M., Itakura, M., Sugawara, M., Suzuki, A., Sasaki, Y., Takeda, M., Tago, K., Ohbayashi, T., Aono, T., Aoyagi, L. N., Shimada, H., Shingubara, R., Masuda, S., Shibata, A., Shirasu, K., Wagai, R., Akiyama, H., … Minamisawa, K. (2024). Does Rhizobial Inoculation Change the Microbial Community in Field Soils? A Comparison with Agricultural Land-use Changes. Microbes and Environments, 39(3). https://doi.org/10.1264/jsme2.ME24006
Isermeyer, H. (1952). Eine einfache Methode zur Bestimmung der Bodenatmung und der Karbonate im Boden. Zeitschrift Für Pflanzenernährung, Düngung, Bodenkunde, 56(1-3), 26-38. https://doi.org/10.1002/jpln.19520560107
Kotroczó, Z., Makádi, M., Kocsis, T., Béni, Á., Várbíró, G., & Fekete, I. (2023). Long-Term Changes in Organic Matter Content and Soil Moisture Determine the Degree of Root and Soil Respiration. Plants, 12(2), 251. https://doi.org/10.3390/plants12020251
Kuzyakov, Y., & Blagodatskaya, E. (2015). Microbial hotspots and hot moments in soil: Concept & review. Soil Biology and Biochemistry, 83, 184-199. https://doi.org/10.1016/j.soilbio.2015.01.025
M. Tahat, M., M. Alananbeh, K., A. Othman, Y., & I. Leskovar, D. (2020). Soil Health and Sustainable Agriculture. Sustainability, 12(12), 4859. https://doi.org/10.3390/su12124859
Ma, J., Qiao, J., Cao, Y., & Cheng, Z. (2026). Harnessing artificial intelligence to decode the rhizosphere microbiome. aBIOTECH, 7(1), 100005. https://doi.org/10.1016/j.abiote.2025.100005
Mondaca, P., Celis-Diez, J. L., Díaz-Siefer, P., Olmos-Moya, N., Montero-Silva, F., Molina, S., Fontúrbel, F. E., Aponte, H., Mandakovic, D., Bastidas, B., Arellano, E. C., Lavandero, B., Carvajal, M., & Gaxiola, A. (2024). Effects of sustainable agricultural practices on soil microbial diversity, composition, and functions. Agriculture, Ecosystems & Environment, 370, 109053. https://doi.org/10.1016/j.agee.2024.109053
Nikolaidis, N. P., & Bidoglio, G. (2013). Soil Organic Matter Dynamics and Structure. Içinde E. Lichtfouse (Ed.), Sustainable Agriculture Reviews: Volume 12 (ss. 175-199). Springer Netherlands. https://doi.org/10.1007/978-94-007-5961-9_6
O’Callaghan, M., Ballard, R. A., & Wright, D. (2022). Soil microbial inoculants for sustainable agriculture: Limitations and opportunities. Soil Use and Management, 38(3), 1340-1369. https://doi.org/10.1111/sum.12811
Pan, X., Yu, H., Zhang, B., Guan, Y., Zhang, N., Du, H., Liu, F., Yu, J., Wang, Q., & Liu, J. (2025). Effects of organic fertilizer replacement on the microbial community structure in the rhizosphere soil of soybeans in albic soil. Scientific Reports, 15(1), 12271. https://doi.org/10.1038/s41598-025-96463-z
Pold, G., Grandy, A. S., Melillo, J. M., & DeAngelis, K. M. (2017). Changes in substrate availability drive carbon cycle response to chronic warming. Soil Biology and Biochemistry, 110, 68-78. https://doi.org/10.1016/j.soilbio.2017.03.002
Sarwar, M., & Kremer, R. J. (1995). Enhanced suppression of plant growth through production of L-tryptophan-derived compounds by deleterious rhizobacteria. Plant and Soil, 172(2), 261-269. https://doi.org/10.1007/BF00011328
Shen, Z., Ruan, Y., Chao, X., Zhang, J., Li, R., & Shen, Q. (2015). Rhizosphere microbial community manipulated by 2 years of consecutive biofertilizer application associated with banana Fusarium wilt disease suppression. Biology and Fertility of Soils, 51(5), 553-562. https://doi.org/10.1007/s00374-015-1002-7
Soong, J. L., Fuchslueger, L., Marañon-Jimenez, S., Torn, M. S., Janssens, I. A., Penuelas, J., & Richter, A. (2020). Microbial carbon limitation: The need for integrating microorganisms into our understanding of ecosystem carbon cycling. Global Change Biology, 26(4), 1953-1961. https://doi.org/10.1111/gcb.14962
Souza, R. de, Ambrosini, A., & Passaglia, L. M. P. (2015). Plant growth-promoting bacteria as inoculants in agricultural soils. Genetics and Molecular Biology, 38, 401-419. https://doi.org/10.1590/S1415-475738420150053
Sun, R., Guo, X., Wang, D., & Chu, H. (2015). Effects of long-term application of chemical and organic fertilizers on the abundance of microbial communities involved in the nitrogen cycle. Applied Soil Ecology, 95, 171-178. https://doi.org/10.1016/j.apsoil.2015.06.010
Szczerba, A., Płażek, A., Kopeć, P., Surówka, E., & Dubert, F. (2025). Mitigating soil drought effects in soybean with Bradyrhizobium Japonicum inoculants. BMC Plant Biology, 25(1), 1533. https://doi.org/10.1186/s12870-025-07571-x
Tang, J., Li, Y., Zhang, L., Mu, J., Jiang, Y., Fu, H., Zhang, Y., Cui, H., Yu, X., & Ye, Z. (2023). Biosynthetic Pathways and Functions of Indole-3-Acetic Acid in Microorganisms. Microorganisms, 11(8), 2077. https://doi.org/10.3390/microorganisms11082077
THALMANN, A. (1968). Zur Methodik der Bestimmung der DehydrogenaseaktivitAt im Boden mittels triphenytetrazoliumchlorid (TTC). Landwirtsch. Forsch., 21, 249-258.
Wei, M., Hu, G., Wang, H., Bai, E., Lou, Y., Zhang, A., & Zhuge, Y. (2017). 35 years of manure and chemical fertilizer application alters soil microbial community composition in a Fluvo-aquic soil in Northern China. European Journal of Soil Biology, 82, 27-34. https://doi.org/10.1016/j.ejsobi.2017.08.002
Wei, W., Ma, M., Jiang, X., Meng, F., He, P., & Li, J. (2026). Decade-long fertilization and Bradyrhizobium inoculation reconfigure soybean rhizosphere microecology through fungal community assembly and metabolic niche partitioning. Journal of Integrative Agriculture, 25(5), 2093-2108. https://doi.org/10.1016/j.jia.2025.07.010
Wu, L., Jiang, Y., Zhao, F., He, X., Liu, H., & Yu, K. (2020). Increased organic fertilizer application and reduced chemical fertilizer application affect the soil properties and bacterial communities of grape rhizosphere soil. Scientific Reports, 10(1), 9568. https://doi.org/10.1038/s41598-020-66648-9
Xing, P., Zhao, Y., Guan, D., Li, L., Zhao, B., Ma, M., Jiang, X., Tian, C., Cao, F., & Li, J. (2022). Effects of Bradyrhizobium Co-Inoculated with Bacillus and Paenibacillus on the Structure and Functional Genes of Soybean Rhizobacteria Community. Genes, 13(11), 1922. https://doi.org/10.3390/genes13111922
Zhao, J., Ni, T., Li, J., Lu, Q., Fang, Z., Huang, Q., Zhang, R., Li, R., Shen, B., & Shen, Q. (2016). Effects of organic–inorganic compound fertilizer with reduced chemical fertilizer application on crop yields, soil biological activity and bacterial community structure in a rice–wheat cropping system. Applied Soil Ecology, 99, 1-12. https://doi.org/10.1016/j.apsoil.2015.11.006
Zhao, Y., Guan, D., Liu, X., Gao, G.-F., Meng, F., Liu, B., Xing, P., Jiang, X., Ma, M., Cao, F., Li, L., & Li, J. (2022). Profound Change in Soil Microbial Assembly Process and Co-occurrence Pattern in Co-inoculation of Bradyrhizobium japonicum 5038 and Bacillus aryabhattai MB35-5 on Soybean. Frontiers in Microbiology, 13. https://doi.org/10.3389/fmicb.2022.846359
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